Abstract
You may have seen kombucha at the grocery store marketed as a healthy food choice. Did you know this drink is made with a special biofilm that ferments sugar into the tangy, fizzy drink? How does it do that? In this experiment, you'll learn how to make your own kombucha from a biofilm and what tea or sugar substrates you can change!
Summary
None
Readily available.
Be careful when handling hot objects. Gloves are recommended to prevent contamination of the kombucha solution. Do NOT drink the experimental kombucha, as harmful bacteria can grow in the solution and make you sick.
Objective
In this science experiment, you will test how changing the tea or sugar substrates used by the SCOBY biofilm impacts the fermentation process by measuring the biochemistry of the kombucha solution over time.
Introduction
Kombucha Biochemistry
Have you ever tried a fizzy, fruity kombucha from the grocery store? Kombucha is a carbonated, fermented drink that is made of tea and sugar. The kombucha is created by a symbiotic culture of bacteria and yeast (SCOBY) that ferments or breaks down the sugar and tea substrate reactants to create multiple products. Reactants are the starting material of a chemical reaction, while the products are the end material. This process is more complex than typical lactic acid fermentation performed by only yeast because the SCOBY also contains a co-culture of bacteria. A co-culture is any combination of two or more microorganisms. These bacteria also ferment the sugar and form a gelatinous biofilm with the yeast. A biofilm is a group of symbiotic microorganisms that is known for creating a large structure that sticks to surfaces.
So, how does the SCOBY biofilm create the kombucha solution? The SCOBY biofilm ferments the sugar sucrose into carbon dioxide and acetic acid through multiple chemical reactions right after each other. First, the yeast in the SCOBY breaks down sucrose into fructose and glucose through a hydrolysis reaction. A hydrolysis chemical reaction requires water to break apart a molecule. In this chemical reaction, water separates the disaccharide sucrose into its monosaccharide components (fructose and glucose). Next, the fructose and glucose are further broken down into ethanol and carbon dioxide. Carbon dioxide is what creates the fizziness of the drink.

Chemical reaction showing the break down of sucrose into it's component parts glucose and fructose.
Equation 1. Yeast breaks down sugar molecules. In this chemical reaction, sucrose is hydrolyzed by yeast. Yeast then performs a secondary reaction to break down the monosaccharides (fructose, glucose) into ethanol and carbon dioxide.
After the yeast facilitates these chemical reactions, bacteria further breaks down ethanol into acetic acid. This process is known as lactic acid fermentation and changes the pH of the solution over time, making it more acidic as it ferments. This vinegar byproduct is also what gives kombucha its tangy taste. All of these reactions occur in an aerobic environment, meaning that the chemical reaction occurs in the presence of air.
Equation 2. Acetic acid bacteria oxidization of ethanol. Oxidation of ethanol chemical reaction performed by acetic acid bacteria in kombucha. Additional reactions to break down remaining sugars.
Claimed Health Benefits of Kombucha
Many research articles talk about the health benefits of kombucha due to its complex biochemistry. But what makes kombucha so unique? The SCOBY biofilm of yeast and bacteria in the presence of tea allows for the production of many other products besides carbon dioxide and acetic acid. These products include probiotics, antioxidants, and metabolites. Some of these metabolites include essential nutrients such as vitamins and minerals. Kombucha also contains healthful biomolecules, including organic acid compounds and tea polyphenols. This combination of products is hypothesized by researchers to give this drink its health benefits. More research is needed in humans to see how kombucha impacts overall health and a healthy gut or microbiome. The microbiome is the composition of bacteria living in your gut to help digest your food and is an exciting new area of biomedical research. Early research in this field, cited in the bibliography, has shown that having a diverse microbiome has been associated with better digestion and overall health.
Equation 3. Conversion of sugars into organic acids by bacteria. Additional chemical reactions by bacteria break down the remaining monosaccharide sugars to create gluconic or lactic acid.
Measuring Kombucha Biochemistry
Now that you know about the biochemistry of kombucha, how do you know when the SCOBY is done fermenting the kombucha solution? Researchers and professional brewers use a refractometer to measure the fermentation rate of the substrates in the kombucha solution during the primary fermentation process. A refractometer uses a prism to measure the refraction or bending of light through a solution, which occurs more when more materials are in the solution. A refractometer can measure the density of solids in a liquid (specific gravity) and the percentage of sugar in a solution (Brix). Other simultaneous measurements include the pH and temperature of the solution to determine when the fermentation process is over. The pH of the solution needs to stay within a specific range during fermentation to prevent the growth of other microorganisms, such as mold and harmful bacteria. That is why it is so important not to drink your experiments!
Variations of kombucha have popped up across the US marketplace, but these include additives, such as juice, other teas, and herbs, which are typically added during the secondary fermentation process. But what if we changed the substrates during the primary fermentation? How would that affect the fermentation process? Changing the substrate or material that the SCOBY uses can change the microbial composition of the biofilm culture over time, resulting in differences in the biochemistry of the resulting solution. How can we test what substrates have the biggest impact on the biochemistry of the kombucha solution? In this experiment, you will find out!
Terms and Concepts
- Symbiotic culture of bacteria and yeast (SCOBY)
- Fermentation
- Substrate
- Reactant
- Product
- Lactic acid fermentation
- Co-culture
- Biofilm
- Symbiotic
- Hydrolysis reaction
- Disaccharide
- Monosaccharide
- Aerobic environment
- Biochemistry
- Metabolites
- Organic acid
- Microbiome
- Refractometer
- Primary fermentation
- Refraction
- Specific gravity
- Brix
- pH
- Secondary fermentation
Questions
- What is a biofilm and substrate?
- What conditions are required to create an aerobic environment, and why is this important during kombucha fermentation?
- What chemical reactions are mediated by yeast, and which by bacteria?
- Why is kombucha considered a health drink?
- What does a refractometer measure? Can it be used as a readout of fermentation? Why or why not?
- Can pH be used to determine when kombucha is done fermenting? Are there other measures, too?
Bibliography
-
Wang, B. (2022, November). Kombucha: Production and Microbial Research. Retrieved August 13, 2024.
- Costa, M., et al. (2022, December 14). Kombuchas from Green and Black Tea Modulate the Gut Microbiota and Improve the Intestinal Health of Wistar Rats Fed a High-Fat High-Fructose Diet. Retrieved August 22, 2024.
-
Su, J. (2023, September). Research progress on alternative kombucha substrate transformation and the resulting active components. Retrieved August 13, 2024.
-
ACS Chemistry for Life. (2024, March 17). Better kombucha brewing through chemistry. Retrieved August 13, 2024.
-
Jaywant, S., et al. (2022, March). Sensor and Instruments for Brix Measurement: A Review. Retrieved August 13, 2024.
Materials and Equipment
- Gloves
- Kitchen pot or teapot
- Tea bags or a tea filter (if tea is not already in bags)
- 3 large ½ gallon or gallon glass jars or other similar containers
- Porous cloth (cheesecloth or cotton fabric recommended)
- Filtered tap water, well water (not chlorine-treated), or bottled water
- Tea substrate options: black tea, green tea, oolong tea, white tea, or herbal tea
- Sweetener substrate options: granulated sugar, honey, or artificial sweeteners
- 3 SCOBY biofilms with kombucha starter culture
- pH Test Strips or pH meter
- Thermometer or temperature indicator sticker
- Refractometer with pipette and cleaning lens wipe included
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Experimental Procedure

Experimental Background
In this experiment, you will investigate how changing the substrate (tea or sweetener) for your SCOBY biofilm changes the biochemistry of the kombucha solution. In this experiment, you will change only change one substrate at a time (tea or sweetener) to create a controlled experiment and compare these changes to your black tea and granulated sugar control solution. You will track how changing each of the substrates impacts the biofilm's fermentation process and the resulting kombucha solution by taking samples of the solution and testing some of the biochemical changes (pH, temperature, and sugar content) over time.
Experimental Set-Up
Before you start your experiment, it is important to remember that microorganisms are everywhere. They are on your skin, on surfaces, and on your equipment. Contamination of your culture can prevent the SCOBY from growing and thriving, so cleaning your equipment well and wearing gloves is very important.
- Put gloves on before handling your equipment.
- Clean or sterilize your equipment, including your pot, ½ gallon jars, and measuring tools with hot water and soap to remove all microbial contaminants before creating your kombucha solution.
- Rinse very well after washing with hot water to remove any residual soap.
- Allow equipment to dry before use.
Experimental Protocol
To create the kombucha solution containing your substrates, you will make sweetened tea and allow it to cool before you add in the SCOBY biofilm and the kombucha starter culture that comes with the SCOBY biofilm, which also contains additional microorganisms. Repeat this protocol for each kombucha solution. For example, the protocol will create 1 of each of the following solutions:
- Positive control kombucha (black tea + granulated sugar substrates)
- Experimental kombucha #1 (different tea substrate + granulated sugar)
- Experimental kombucha #2 (black tea + different sweetener)
The microorganisms within the biofilm will then start the complex fermentation process, interacting with the substrates to change the solution's biochemistry over time. You will take measurements throughout this process. Depending on the surrounding environment's temperature, this fermentation process can take anywhere from 1 to 4 weeks. Let's get started making a solution!
- Put on a new set of gloves.
- Brew tea with the following steps:
- Boil 2 cups of bottled, filtered, or well water.
- Note: Filtering tap water removes the chlorine and chloramines from the water. These particular chemicals that help make our drinking water safe and antimicrobial, will inhibit the biofilm from fermenting the solution.
- Steep 1 tablespoon of loose tea in a filter in the hot water for 5 minutes.
- Remove the tea leaves from the water.
- Boil 2 cups of bottled, filtered, or well water.
- Mix ½ cup of sweetener into the hot tea until it dissolves.
- Add 5 additional cups of water to a ½ gallon jar.
- Add the sweetened tea to the ½ gallon jar.
- Take the temperature reading of the diluted sweetened tea solution in the ½ gallon jar. Wait for the solution to cool to room temperature (75℉/25℃).
- Note: Adding the SCOBY and starter culture before the solution is cooled will kill off the microorganisms in the biofilm and starter culture, preventing the fermentation process.
- Once the diluted sweetened tea solution is at room temperature, add the SCOBY biofilm and the kombucha starter culture that came with the biofilm to the ½ gallon jar.
- Cover the jar with cloth when not taking measurements. This will allow the solution to interact with the air, permitting the process of aerobic fermentation.
- Observe the solution and record your observations in a data table, like Table 1. Write down any changes you see to the solution, such as bubbles, color changes, clarity/turbidity, or the presence of a new SCOBY biofilm.
- CAUTION: Do not drink your experiment! Aseptic or sterile conditions and thorough testing are required to sell drinkable kombucha from the store. These conditions are not easily achievable at home, so do not drink your experimental kombucha!
- Note: The SCOBY may change locations during the fermentation process. This is expected since the air bubbles created during this process can cause the SCOBY biofilm to float around in the solution or adhere to surfaces and stay in place.
- Measure the pH of the solution using pH litmus paper.
- Remove the cloth from the top of the ½ gallon jar.
- Carefully dip the bottom 1 cm of the litmus paper into the kombucha solution.
- Remove the litmus paper from the solution and wait 1 minute for the solution to dry.
- Compare the pH litmus paper to the quantification scale (on the pH paper packaging).
- Record your observations in your data table, like Table 1 below.
- Note: Variations in the substrate can impact the total fermentation time. When starting kombucha, the initial pH should be below 4.6. Commercially bought kombucha is typically done brewing when the pH is within the range of 2.5 - 3.0.
- Measure the temperature of the room and each kombucha solution.
- Remove the cloth from the top of the ½ gallon jar to take your measurements.
- Follow the instructions for your thermometer. If using a physical thermometer, make sure the probe is fully below the solution surface. If using a noncontact infrared thermometer, take the surface reading of the solution.
- Note: To prevent contamination, we recommend using a no-touch temperature probe. If using a physical probe, be sure to decontaminate it between each temperature reading by dipping it in isopropanol (rubbing alcohol) to disinfect it and let it air dry.
- Measure the room temperature each time you measure the temperature of the solution.
- Measure the biochemistry of the kombucha solution using a refractometer.
- Test the refractometer's calibration by performing a baseline reading with the same water used to make the kombucha solutions.
- Using the pipette, pipette up less than 0.5 mL of water.
- Flip up the cover plate of the refractometer to expose the prism assembly.
- Add 2-3 drops or enough volume to cover the surface with water to the top of the prism assembly.
- Slowly flip the cover plate onto the water to cover the prism assembly.
- Note: For an accurate reading, the solution must completely cover the prism assembly surface without any bubbles. If bubbles form, pull the cover plate back up again and slowly lower it to remove them. If bubbles are still present, add more solution to prevent them from forming.
- Hold the refractometer horizontal to the ground on the rubber grip, and slowly move it up to your eye to see the reading through the eyepiece.
- Only for checking calibration:
- If the device was calibrated correctly, the white light line should align with the 0 at the bottom of the scale.
- If the device is not calibrated correctly, move the calibration screw to align the white light with the 0 line when the water is on the prism assembly.
- Only for checking calibration:
- Using the cleaning wipe included with the refractometer, wipe the liquid off the surface of the prism assembly and cover plate.
- Note: Using other types of wipes or fabric can scratch the prism assembly surface and impact your readings. If a wipe was not included with your refractometer, use soft materials such as eyeglass wipes.
- Next, test the kombucha solution's sugar content and density.
- Repeat the steps above but with a sample of the kombucha solution instead of water. To obtain more accurate readings, clean the surface of the prism assembly between readings with water. Add water to the surface of the prism assembly between each reading and wipe it off with the cloth provided with the refractometer.
- Test the refractometer's calibration by performing a baseline reading with the same water used to make the kombucha solutions.
- Place the cloth back on the kombucha solution after you are done taking each of your measurements.
- A solution's pH is an acidity scale representing a tenfold change in the concentration of hydrogen ions in a solution. Calculate the number of free hydrogen ions in the solution from the pH reading using the following equation:
- pH = -log[H+] Rearrange the equation to [H+] = 10-pH to plug in the pH value to get the hydrogen ion concentration in moles per liter.
- Example calculation: If the pH is 4. [H+] = 10-pH = 10-4 = 0.0001 mol/L
- pH = -log[H+] Rearrange the equation to [H+] = 10-pH to plug in the pH value to get the hydrogen ion concentration in moles per liter.
- Take readings at least once a week. If possible, take additional measurements every 2-3 days in the first two weeks. Allow the fermentation process to take place over the next 1-4 weeks.
| Biofilm substrates |
Week 0: Observations and Measurements |
Week 1: Observations and measurements |
Week 2: Observations and measurements |
Week 3: Observations and measurements |
Week 4: Observations and measurements |
|---|---|---|---|---|---|
|
Positive control kombucha (black tea + granulated sugar) |
Observations: pH: [H+]: Temp (soln): Temp (room): Sugar: SG: |
... | |||
|
Experimental kombucha #1 (different tea substrate + granulated sugar) |
... | ||||
|
Experimental kombucha #2 (Black tea + different sweetener substrate) |
Table 1. Example data table of monitoring kombucha solution biochemistry changes over time.
Conclusions
- How does the pH and hydrogen ion concentrations change over time? Make a graph to compare their relationship with time on the x-axis and a scale to include both pH and hydrogen ion concentration on the y-axis. Make a double-line graph to directly compare them. What is their relationship? Use the pH/acidity equation to help inform your answer.
- How does changing the substrates impact the solution's initial and final sugar content? Did the sugar ever run out based on your measurements? Why do you think that is?
- Do the substrates impact the color of the solution? Does the color of the solution change over time? What do you think drives this change?
- How does the type of substrate impact the pH of the solution, the sugar content, the solution temperature, or the overall fermentation time? Make a graph comparing each of their relationships.
- How did the different substrates impact the biochemistry of the kombucha solution?
Ask an Expert
Global Goals
The United Nations Sustainable Development Goals (UNSDGs) are a blueprint to achieve a better and more sustainable future for all.
Variations
- How does the change in substrate impact the biofilm and kombucha solution over time? Use the biochemistry of the solution as a readout to find out. Reuse 1 cup of kombucha solution and your SCOBY to restart the experiment. Repeat the experiment for 3 rounds. Does the fermentation time shorten over time? What variables change?
- Does the room's temperature slow down or speed up the fermentation reaction? Design an experiment using your fridge and a heating pad to find out.
- Can you brew kombucha in different containers, such as a silicon bag? These are physical changes used by bioengineers use to see how manipulating biological conditions can speed up or slow down biological processes. How does this change the fermentation time and biochemistry of the solution?
- Does changing other variables, such as the amount of substrate or the steep time of the tea, impact the fermentation time and biochemistry of the kombucha solution?
- How long can the chemical reaction continue with the biofilm? When does the solution start to smell like vinegar? Compare the smell to store-bought vinegar, such as apple cider vinegar, which contains 5% acetic acid.
- Does changing the content of SCOBY microorganisms impact the fermentation time and biochemistry? For example, compare the fermentation time and biochemistry of a Jun SCOBY in a green tea and honey solution to a kombucha SCOBY in a black tea and sugar solution.
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